PROJECT INFORMATION
GOLD Project ID
Gp0396270  
Project Name
Marine pelagic microbial communities from Tasman Sea - 102.100.100/35871  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Metagenome from Australian marine benthic and pelagic environments
NCBI BioProject Accession PRJNA385736
NCBI Locus Tag
  
NCBI BioSample Accession SAMN07483129
Source Sample ID
PI Andrew Bissett
Added By JGI automated process on 2019-02-04
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Commonwealth Scientific and Industrial Research Organisation (CSIRO) (Australia)
Collaborating Institute
  
Funding Agency
  
Project Description
Marine pelagic microbial communities from Tasman Sea  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX3497188  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35871_16S_BB2NF
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3497189  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35871_18S_B87L6
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3075790  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35871_18S_B87L6
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3076213  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35871_A16S_B9YMF
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3076212  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35871_16S_BB2NF
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX3497195  (Link to NCBI )
Experiment Title Marine_metagenomics
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection PCR
Library Name 102.100.100/35871
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
 
SRA Experiment Id SRX3075789  (Link to NCBI )
Experiment Title Marine_metagenomics
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection PCR
Library Name 102.100.100/35871
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
 
SRA Experiment Id SRX3497194  (Link to NCBI )
Experiment Title Marine_amplicon
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name 35871_A16S_B9YMF
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Marine microbial communities from benthic and pelagic environments in Australia
Biosample Marine pelagic microbial communities from Tasman Sea - 102.100.100/35871
Analysis Projects Combined Assembly of marine microbial communities from pelagic environments in Australia
Marine pelagic microbial communities from Tasman Sea - 102.100.100/35871
Number of Analysis Projects (AP) 2
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Marine pelagic microbial communities from Tasman Sea - 102.100.100/35871
Other Names (alias, synonyms, short names)
  
Sample Description
Marine pelagic microbial communities from Tasman Sea  
SAMPLE TAXONOMY
NCBI Taxonomy ID 408172
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Epipelagic  
Specific Ecosystem
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?