PROJECT INFORMATION
GOLD Project ID
Gp0376685  
Project Name
Thermogemmatispora onikobensis NBRC 111776  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Thermogemmatispora onikobensis NBRC 111776
NCBI BioProject Accession PRJDB5101
NCBI Locus Tag
BGC09  
NCBI BioSample Accession SAMD00057755
PI
Added By JGI automated process on 2019-01-03
Last Modified By Supratim Mukherjee on 2021-03-25
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Industrial
Sequencing Center National Institute of Technology and Evaluation Biological Resource Center
Collaborating Institute
  
Funding Agency
  
Project Description
Thermogemmatispora onikobensis NBRC 111776 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications Genome announcements Draft Genome Sequence of Thermogemmatispora onikobensis NBRC 111776T, an Aerial Mycelium- and Spore-Forming Thermophilic Bacterium Belonging to the Class Ktedonobacteria.

Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Thermogemmatispora onikobensis NBRC 111776 genome sequencing
Organism Thermogemmatispora onikobensis NBRC 111776
Analysis Projects Thermogemmatispora onikobensis NBRC 111776
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
61  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0492713
Organism Name
Thermogemmatispora onikobensis NBRC 111776  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CHLOROFLEXI  
Genus
Thermogemmatispora  
Genus Synonyms
  
Species
Thermogemmatispora onikobensis  
Subspecies
  
Species Synonyms
  
Strain
NBRC 111776  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
NBRC 111776  
Type Strain
Yes  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 732234
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Chloroflexi  
NCBI Class
Ktedonobacteria  
NCBI Order
Thermogemmatisporales  
NCBI Family
Thermogemmatisporaceae  
NCBI Genus
Thermogemmatispora  
NCBI Species
Thermogemmatispora onikobensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Geothermal soil
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?