PROJECT INFORMATION
GOLD Project ID
Gp0342040  
Project Name
Micrococcus luteus NCTC 2665  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject ID 251923
NCBI BioProject Accession PRJEB6403
NCBI Locus Tag
  
NCBI BioSample Accession SAMEA3867442
PI
Added By JGI automated process on 2018-10-19
Last Modified By JGI automated process on 2019-06-05
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Wellcome Trust Sanger Institute (United Kingdom)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of Micrococcus luteus NCTC 2665 from Public Health England's National Collection of Type Cultures (NCTC) using long-read PacBio SMRT technology  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id ERX1448297  (Link to NCBI )
Experiment Title PacBio RS sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 15714410
Library Layout SINGLE
Library Instrument PAC_BIO_RS
PROJECT COMPOSITION
Study Genome sequencing of bacterial type strains from NCTC culture collection
Organism Micrococcus luteus NCTC 2665
Analysis Projects Micrococcus luteus NCTC 2665
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0001264
Organism Name
Micrococcus luteus NCTC 2665  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Micrococcus  
Genus Synonyms
  
Species
Micrococcus luteus  
Subspecies
  
Species Synonyms
  
Strain
NCTC 2665  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
NCTC 2665  
Type Strain
Unknown  
Exemplar DOI
10.1601/ex.5829  
Exemplar Name
Micrococcus luteus  
Taxon DOI
10.1601/tx.5829  
Biosafety Level
  
Organism Comments
set to private during organism consolidation, candidate for deletion  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 465515
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Micrococcales  
NCBI Family
Micrococcaceae  
NCBI Genus
Micrococcus  
NCBI Species
Micrococcus luteus  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Lab synthesis  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 15145
Genbank 16S ID AF542073
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Tetrads
Diseases None
Known Habitats Soil
Metabolisms
  
Phenotypes Metal resistant
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?