PROJECT INFORMATION
GOLD Project ID
Gp0236301  
Project Name
Rachicladosporium sp. CCFEE 5018  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Rachicladosporium sp. CCFEE 5018 Genome Sequencing
NCBI BioProject ID 342238
NCBI BioProject Accession PRJNA342238
NCBI Locus Tag
B0A51  
NCBI BioSample Accession SAMN06285185
PI
Added By JGI automated process on 2017-08-31
Last Modified By Hema Katta on 2018-07-20
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of California, Riverside (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Rachicladosporium sp. CCFEE 5018 Genome Sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequences of the Antarctic Endolithic Fungi CCFEE 5527 and sp. CCFEE 5018.

Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX2532961
Experiment Title DNA-Seq of Rachicladosporium monterosium CCFEE5018
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Rmonterosium.DNA.FC470
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX2532962
Experiment Title DNA-Seq of Rachicladosporium monterosium CCFEE5018
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Rmonterosium.DNA.FC459
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Genome sequencing of Antarctic fungi
Organism Rachicladosporium sp. CCFEE 5018
Analysis Projects Rachicladosporium sp. CCFEE 5018
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0385086
Organism Name
Rachicladosporium sp. CCFEE 5018  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Rachicladosporium  
Genus Synonyms
  
Species
Rachicladosporium sp. CCFEE 5018  
Subspecies
  
Species Synonyms
  
Strain
CCFEE 5018  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1974281
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Ascomycota  
NCBI Class
Dothideomycetes  
NCBI Order
Capnodiales  
NCBI Family
Cladosporiaceae  
NCBI Genus
Rachicladosporium  
NCBI Species
Rachicladosporium sp. CCFEE 5018  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?