PROJECT INFORMATION
GOLD Project ID
Gp0235519  
Project Name
Puccinia striiformis Race 31  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Puccinia striiformis Race 31 Genome Sequencing
NCBI BioProject ID 277552
NCBI BioProject Accession PRJNA277552
NCBI Locus Tag
VM40  
NCBI BioSample Accession SAMN03389099
PI
Added By JGI automated process on 2017-08-31
Last Modified By JGI automated process on 2017-09-01
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Agricultural
Sequencing Center National Research Centre on Plant Biotechnology
Collaborating Institute
  
Funding Agency
  
Project Description
Puccinia striiformis Race 31 Genome Sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX5401355  (Link to NCBI )
Experiment Title HiSeq_Illumina_paired-end (WGS) libraries of Race 31 of Puccinia striiformis
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection PCR
Library Name HiSeq_Illumina_paired-end (WGS)
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
PROJECT COMPOSITION
Study Genome Sequencing of Race 31 of Puccinia striiformis
Organism Puccinia striiformis Race 31
Analysis Projects Puccinia striiformis Race 31
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0384423
Organism Name
Puccinia striiformis Race 31  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-BASIDIOMYCOTA  
Genus
Puccinia  
Genus Synonyms
  
Species
Puccinia striiformis  
Subspecies
  
Species Synonyms
  
Strain
Race 31  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 27350
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Basidiomycota  
NCBI Class
Pucciniomycetes  
NCBI Order
Pucciniales  
NCBI Family
Pucciniaceae  
NCBI Genus
Puccinia  
NCBI Species
Puccinia striiformis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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