PROJECT INFORMATION
GOLD Project ID
Gp0226204  
Project Name
Archaeoglobus fulgidus DSM 4304 transcriptome - Afu E  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Archaeoglobus fulgidus DSM 4304 transcriptome - Afu E
NCBI BioProject ID 425493
NCBI BioProject Accession PRJNA425493
NCBI Locus Tag
  
NCBI BioSample Accession SAMN08220155
PI Todd Lowe
Added By JGI automated process on 2017-08-25
Last Modified By JGI automated process on 2019-11-03
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Archaeoglobus fulgidus DSM 4304 transcriptome - Sample from keto phase  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid RNA
Sequencing Strategy
Transcriptome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Sequencing Archaeal Transcriptomes
Organism Archaeoglobus fulgidus DSM 4304
Analysis Projects
  
Number of Analysis Projects (AP)
0  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-1TB
Illumina HiSeq 2500
Library Method (MIGS-28)
Illumina Low Input RNASeq w/rRNA Depletion, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0015557
Organism Name
Archaeoglobus fulgidus DSM 4304  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-ARCHAEOGLOBI  
Genus
Archaeoglobus  
Genus Synonyms
  
Species
Archaeoglobus fulgidus  
Subspecies
  
Species Synonyms
  
Strain
DSM 4304  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 4304  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.407  
Exemplar Name
Archaeoglobus fulgidus  
Taxon DOI
10.1601/tx.407  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 224325
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Archaeoglobi  
NCBI Order
Archaeoglobales  
NCBI Family
Archaeoglobaceae  
NCBI Genus
Archaeoglobus  
NCBI Species
Archaeoglobus fulgidus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 158735
Genbank 16S ID X05567
GENERAL PROPERTIES
Oxygen Requirement
Obligate anaerobe  
Cell Shape
  
Motility
Motile  
Sporulation
  
Temperature Range
Hyperthermophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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