PROJECT INFORMATION
GOLD Project ID
Gp0208377  
Project Name
Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG
NCBI BioProject Accession PRJNA406779
NCBI Locus Tag
CNN27  
NCBI BioSample Accession SAMN07631775
PI Erik Lilleskov
Added By JGI automated process on 2017-03-10
Last Modified By JGI automated process on 2022-03-14
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Peatland microbial communities from PEATcosm Experiment in MTU Mesocosm Facility, Houghton  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
Unrestricted  
JGI Award DOI 10.46936/10.25585/60001027
JGI Portal Download Raw Sequence Data
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX3293761  (Link to NCBI )
Experiment Title PEATcosm2014_Bin17_10_metaG
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name BPOGW
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes
Biosample Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG
Analysis Projects Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG
PEATcosm2014_co-assembly _10_metaG
Number of Analysis Projects (AP) 2
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-1TB
Illumina HiSeq 2500
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG
Other Names (alias, synonyms, short names)
  
Sample Description
Peatland microbial communities from PEATcosm Experiment in MTU Mesocosm Facility, Houghton  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1325974
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Peat  
Specific Ecosystem
Bog  

 

 

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