PROJECT INFORMATION
GOLD Project ID
Gp0203590  
Project Name
Opitutaceae bacterium IG16b  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Opitutaceae bacterium IG16b
NCBI BioProject ID 319155
NCBI BioProject Accession PRJNA319155
NCBI Locus Tag
Verru16B  
NCBI BioSample Accession SAMN04880612
PI
Added By JGI automated process on 2017-02-17
Last Modified By
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center Microorganisms, Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures
Collaborating Institute
  
Funding Agency
  
Project Description
Opitutaceae bacterium IG16b Genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Opitutaceae bacterium IG16b Genome sequencing
Organism Opitutaceae bacterium IG16b
Analysis Projects Opitutaceae bacterium IG16b
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio RS
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0364476
Organism Name
Opitutaceae bacterium IG16b  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
VERRUCOMICROBIA  
Genus
  
Genus Synonyms
  
Species
Opitutaceae bacterium IG16b  
Subspecies
  
Species Synonyms
  
Strain
IG16b  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1838286
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Verrucomicrobia  
NCBI Class
Opitutae  
NCBI Order
Opitutales  
NCBI Family
Opitutaceae  
NCBI Genus
Lacunisphaera  
NCBI Species
Lacunisphaera limnophila  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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