PROJECT INFORMATION
GOLD Project ID
Gp0194029  
Project Name
Pyrodictium delaneyi hulk  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject ID 382239
NCBI BioProject Accession PRJNA382239
NCBI Locus Tag
  
NCBI BioSample Accession SAMN06702682
PI Lucas Demey
Added By Lucas Demey on 2017-01-11
Last Modified By Hema Katta on 2019-01-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Michigan State University (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome of G. hydrogenophila  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Standards in genomic sciences The draft genome of the hyperthermophilic archaeon strain hulk, an iron and nitrate reducer, reveals the capacity for sulfate reduction.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Pyrodictium delaneyi hulk genome sequencing
Organism Pyrodictium delaneyi hulk
Analysis Projects Pyrodictium delaneyi hulk
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
Paired end  
Number Of Reads
  
Read Size
400bp  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0357285
Organism Name
Pyrodictium delaneyi hulk  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
CRENARCHAEOTA  
Genus
Pyrodictium  
Genus Synonyms
  
Species
Pyrodictium delaneyi  
Subspecies
  
Species Synonyms
  
Strain
4021  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1273541
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Crenarchaeota  
NCBI Class
Thermoprotei  
NCBI Order
Desulfurococcales  
NCBI Family
Pyrodictiaceae  
NCBI Genus
Pyrodictium  
NCBI Species
Pyrodictium delaneyi  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Black smokers  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Coccoid  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Hydrothermal sediment
Metabolisms Iron reducer
Phenotypes
  
Energy Sources Chemolithoautotroph

 

 

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