PROJECT INFORMATION
GOLD Project ID
Gp0177193  
Project Name
Coemansia spiralis RSA 1278 Standard Draft  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Coemansia spiralis RSA 1278 Standard Draft
NCBI BioProject ID 363761
NCBI BioProject Accession PRJNA363761
NCBI Locus Tag
BX070  
NCBI BioSample Accession SAMN06265336
PI Joseph Spatafora
Added By JGI automated process on 2016-11-17
Last Modified By JGI automated process on 2019-04-28
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Genome sequencing of a fungus from the early diverging lineage of fungi  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX2954099  (Link to NCBI )
Experiment Title Coemansia spiralis RSA 1278 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BNCXP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX2954098  (Link to NCBI )
Experiment Title Coemansia spiralis RSA 1278 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BNCXP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX2954101  (Link to NCBI )
Experiment Title Coemansia spiralis RSA 1278 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BNCXP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX2954100  (Link to NCBI )
Experiment Title Coemansia spiralis RSA 1278 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BNCXP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX2954093  (Link to NCBI )
Experiment Title Coemansia spiralis RSA 1278 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BNCXP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX2954095  (Link to NCBI )
Experiment Title Coemansia spiralis RSA 1278 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BNCXP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX2954094  (Link to NCBI )
Experiment Title Coemansia spiralis RSA 1278 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BNCXP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX2954097  (Link to NCBI )
Experiment Title Coemansia spiralis RSA 1278 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BNCXP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX2954096  (Link to NCBI )
Experiment Title Coemansia spiralis RSA 1278 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BNCXP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
PROJECT COMPOSITION
Study Expanding fungal reference genomes with early diverging lineages (EDL) of fungi
Organism Coemansia spiralis RSA 1278
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
PacBio RS II
Library Method (MIGS-28)
PacBio >10kb w/ AMPure Bead Size Selection, Tubes  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
45  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0333492
Organism Name
Coemansia spiralis RSA 1278  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ZOOPAGOMYCOTA  
Genus
Coemansia  
Genus Synonyms
  
Species
Coemansia spiralis  
Subspecies
  
Species Synonyms
  
Strain
RSA 1278  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
RSA 1278  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 417178
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Zoopagomycota  
NCBI Class
Kickxellomycetes  
NCBI Order
Kickxellales  
NCBI Family
Kickxellaceae  
NCBI Genus
Coemansia  
NCBI Species
Coemansia spiralis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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