PROJECT INFORMATION
GOLD Project ID
Gp0124179  
Project Name
Aliiroseovarius crassostreae CV919-312  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Aliiroseovarius crassostreae CV919-312
NCBI BioProject ID 291771
NCBI BioProject Accession PRJNA291771
NCBI Locus Tag
AKJ29  
NCBI BioSample Accession SAMN03952659
PI
Added By JGI automated process on 2015-11-06
Last Modified By Hema Katta on 2017-10-27
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center University of Rhode Island
Collaborating Institute
  
Funding Agency
  
Project Description
The purpose of this project is to sequence, assemble and annotate the genome of a bacterial oyster pathogen in order to discover mechanisms of virulence.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequence of Aliiroseovarius crassostreae CV919-312, the Causative Agent of Roseovarius Oyster Disease (Formerly Juvenile Oyster Disease).

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Aliiroseovarius crassostreae CV919-312 genome sequencing
Organism Aliiroseovarius crassostreae CV919-312
Analysis Projects Aliiroseovarius crassostreae CV919-312
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0118619
Organism Name
Aliiroseovarius crassostreae CV919-312  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Aliiroseovarius  
Genus Synonyms
  
Species
Aliiroseovarius crassostreae  
Subspecies
  
Species Synonyms
  
Strain
CV919-312  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9525  
Exemplar Name
Aliiroseovarius crassostreae  
Taxon DOI
10.1601/tx.27093  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 154981
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Aliiroseovarius  
NCBI Species
Aliiroseovarius crassostreae  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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