PROJECT INFORMATION
GOLD Project ID
Gp0120014  
Project Name
Lechevalieria fradiae CGMCC 4.3506  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Lechevalieria fradiae CGMCC 4.3506
NCBI BioProject ID 323115
NCBI BioProject Accession PRJNA323115
NCBI Locus Tag
A8965  
NCBI BioSample Accession SAMN05216553
PI William Whitman
Added By JGI automated process on 2015-08-22
Last Modified By JGI automated process on 2020-04-13
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Genomic Encyclopedia of Type Strains, Phase III the genomes of soil and plant-associated and newly described type strains  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX2155467  (Link to NCBI )
Experiment Title Lechevalieria fradiae CGMCC 4.3506
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name AWNBO
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase III (KMG-III): the genomes of soil and plant-associated and newly described type strains
Organism Lechevalieria fradiae CGMCC 4.3506
Analysis Projects Lechevalieria fradiae CGMCC 4.3506
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-1TB
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0115735
Organism Name
Lechevalieria fradiae CGMCC 4.3506  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Lechevalieria  
Genus Synonyms
  
Species
Lechevalieria fradiae  
Subspecies
  
Species Synonyms
  
Strain
CGMCC 4.3506  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
CGMCC 4.3506  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.10818  
Exemplar Name
Lentzea fradiae  
Taxon DOI
10.1601/tx.32779  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 200378
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Pseudonocardiales  
NCBI Family
Pseudonocardiaceae  
NCBI Genus
Lechevalieria  
NCBI Species
Lechevalieria fradiae  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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