PROJECT INFORMATION
GOLD Project ID
Gp0119339  
Project Name
Streptococcus pasteurianus GED7275A  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Streptococcus pasteurianus
NCBI BioProject ID 272097
NCBI BioProject Accession PRJNA272097
NCBI Locus Tag
HMPREF3205  
NCBI BioSample Accession SAMN03956210
PI
Added By JGI automated process on 2015-07-15
Last Modified By Hema Katta on 2018-03-23
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center The Genome Institute at Washington University (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
HMP reference genome  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Genome Sequences of 14 Firmicutes Strains Isolated from the Human Vagina.

Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX1132009
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection unspecified
Library Name 2895068055
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
Spot Length 200
PROJECT COMPOSITION
Study Human Microbiome Project (HMP) Reference Genomes
Organism Streptococcus pasteurianus GED7275A
Analysis Projects Streptococcus pasteurianus GED7275A
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0115394
Organism Name
Streptococcus pasteurianus GED7275A  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Streptococcus  
Genus Synonyms
  
Species
Streptococcus pasteurianus  
Subspecies
  
Species Synonyms
  
Strain
GED7275A  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 197614
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Streptococcaceae  
NCBI Genus
Streptococcus  
NCBI Species
Streptococcus pasteurianus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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