PROJECT INFORMATION
GOLD Project ID
Gp0110088  
Project Name
Sedimentisphaera cyanobacteriorum L21-RPul-D3  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Sedimentisphaera cyanobacteriorum L21-RPul-D3 Genome sequencing
NCBI BioProject ID 369350
NCBI BioProject Accession PRJNA369350
NCBI Locus Tag
  
NCBI BioSample Accession SAMN06284442
PI Stefan Spring
Added By Stefan Spring on 2015-01-28
Last Modified By Supratim Mukherjee on 2018-11-02
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Leibniz Institute (Germany)
Collaborating Institute Helmholtz Centre for Infection Research (Germany)
Funding Agency German Research Foundation (DFG) (Germany)
Project Description
Diversity of of culturable prokaryotes in hypersaline microbial mats and sediments  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Diversity of culturable anaerobic prokaryotes in hypersaline microbial mats and sediments
Organism Sedimentisphaera cyanobacteriorum L21-RPul-D3
Analysis Projects Sedimentisphaera cyanobacteriorum L21-RPul-D3
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
47  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0109729
Organism Name
Sedimentisphaera cyanobacteriorum L21-RPul-D3  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PLANCTOMYCETES  
Genus
Sedimentisphaera  
Genus Synonyms
  
Species
Sedimentisphaera cyanobacteriorum  
Subspecies
  
Species Synonyms
  
Strain
L21-RPul-D3  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
10.1601/ex.32947  
Exemplar Name
Sedimentisphaera cyanobacteriorum  
Taxon DOI
10.1601/tx.32947  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1940790
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Planctomycetes  
NCBI Class
Phycisphaerae  
NCBI Order
Sedimentisphaerales  
NCBI Family
Sedimentisphaeraceae  
NCBI Genus
Sedimentisphaera  
NCBI Species
Sedimentisphaera cyanobacteriorum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Sediment  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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