PROJECT INFORMATION
GOLD Project ID
Gp0088743  
Project Name
Selenihalanaerobacter shriftii ATCC BAA-73  
Other Names
  
Legacy ER Project ID
71124  
Legacy GOLD ID
Gi0071124  
NCBI BioProject Name Selenihalanaerobacter shriftii ATCC BAA-73
NCBI BioProject ID 245575
NCBI BioProject Accession PRJNA245575
NCBI Locus Tag
EI55  
NCBI BioSample Accession SAMN02745118
PI Markus G��ker
Added By JGI automated process on 2014-03-04
Last Modified By JGI automated process on 2019-09-30
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II: from individual species to whole genera  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX2061181  (Link to NCBI )
Experiment Title Selenihalanaerobacter shriftii ATCC BAA-73
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name XYSZ
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
PROJECT COMPOSITION
Study Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II (KMG-II): from individual species to whole genera
Organism Selenihalanaerobacter shriftii ATCC BAA-73
Analysis Projects Selenihalanaerobacter shriftii ATCC BAA-73
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Illumina HiSeq 2000
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0088743
Organism Name
Selenihalanaerobacter shriftii ATCC BAA-73  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Selenihalanaerobacter  
Genus Synonyms
  
Species
Selenihalanaerobacter shriftii  
Subspecies
  
Species Synonyms
  
Strain
ATCC BAA-73  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC BAA-73  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4608  
Exemplar Name
Selenihalanaerobacter shriftii  
Taxon DOI
10.1601/tx.4608  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 142842
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Halanaerobiales  
NCBI Family
Halobacteroidaceae  
NCBI Genus
Selenihalanaerobacter  
NCBI Species
Selenihalanaerobacter shriftii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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