PROJECT INFORMATION
GOLD Project ID
Gp0087685  
Project Name
Sebastes minor  
Other Names
  
Legacy ER Project ID
70726  
Legacy GOLD ID
Gi0070726  
NCBI BioProject Name Sebastes minor
NCBI BioProject ID 236304
NCBI BioProject Accession PRJNA236304
NCBI Locus Tag
SMIN  
NCBI BioSample Accession
PI
Added By JGI automated process on 2014-02-14
Last Modified By
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center University of Southern California (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Sebastes minor is a member of a marine fishes species flock with an estimated 102 species. Rockfishes of the genus Sebastes support important commercial and recreational fisheries and are the dominant assemblage on cold temperate reefs. Sebastes minor has short lifespan (11 years maximal age recorded) while closely related S. aleutianus can reach age of 205 years old and do not show signs of aging (negligible senescence).  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Sebastes minor
Organism Sebastes minor
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0087685
Organism Name
Sebastes minor  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
CHORDATA  
Genus
Sebastes  
Genus Synonyms
  
Species
Sebastes minor  
Subspecies
  
Species Synonyms
  
Strain
  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 214483
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Metazoa  
NCBI Phylum
Chordata  
NCBI Class
Actinopteri  
NCBI Order
Perciformes  
NCBI Family
Sebastidae  
NCBI Genus
Sebastes  
NCBI Species
Sebastes minor  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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