PROJECT INFORMATION
GOLD Project ID
Gp0070933  
Project Name
Puccinia striiformis f. sp. tritici CY32  
Other Names
  
Legacy ER Project ID
62534  
Legacy GOLD ID
Gi0062534  
NCBI BioProject Name Puccinia striiformis f. sp. tritici CY32
NCBI BioProject ID 176877
NCBI BioProject Accession PRJNA176877
NCBI Locus Tag
D089  
NCBI BioSample Accession SAMN02981480
PI
Added By JGI automated process on 2013-12-04
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Agricultural
Sequencing Center Beijing Genomics Institute (BGI) (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Puccinia striiformis Westend. f. sp. tritici Eriks. is the causal agent of wheat stripe rust, causes serious disease in wheat in many cool and temperate regions of the world. China has the largest epidemic region in the world, and the disease has always been a major constraint for wheat production. The most destructive epidemics that occurred in 1950, 1964, 1990, and 2002 caused yield losses up to 6.0, 3.2, 1.8, and 1.3 million metric tons, respectively, in China, and seven nationwide cultivar replacements have taken place in China since the 1950s due to repeated appearances of new virulent races. Puccinia striiformis is an obligate biotrophic fungal pathogen, and has a complex life cycle that includes five spore stages and two very different hosts, recently it was found to be full lifecycle of rust with berberis spp. as alternate host in western mountainous area of China.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Puccinia striiformis f. sp. tritici CY32
Organism Puccinia striiformis f. sp. tritici CY32
Analysis Projects Puccinia striiformis f. sp. tritici CY32
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0070933
Organism Name
Puccinia striiformis f. sp. tritici CY32  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-BASIDIOMYCOTA  
Genus
Puccinia  
Genus Synonyms
  
Species
Puccinia striiformis  
Subspecies
  
Species Synonyms
  
Strain
f. tritici CY32  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1240226
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Basidiomycota  
NCBI Class
Pucciniomycetes  
NCBI Order
Pucciniales  
NCBI Family
Pucciniaceae  
NCBI Genus
Puccinia  
NCBI Species
Puccinia striiformis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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