PROJECT NAME
GOLD Project ID
Gp0053484  
Project Name
Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion  
Other Names
  
Legacy ER Sample ID
878  
Legacy GOLD ID
Gs0002406  
NCBI BioProject Name
  
NCBI BioProject ID
  
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI Katherine McMahon
Added By Stephanie Malfatti on 2011-07-05
Last Modified By Jyothi Mallajosyula on 2014-02-19
Project Comments
  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metagenome  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Wisconsin, Madison (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Freshwater microbial communities from Lake Mendota and Trout Bog Lake, Wisconsin, USA
Biosamples Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion
Analysis Projects Combined Assembly of freshwater deep hole epilimnion microbial communities from Lake Mendota
Lake Mendota Deep Hole Epilimnion 25Sep08 (Lake Mendota Combined Assembly 24 Epilimnion Samples, Apr 2013 Assem)
Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion
Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion
Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAii
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
41  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion
Other Names (alias, synonyms, short names)
  
Sample Description
  
SAMPLE TAXONOMY
NCBI Taxonomy ID 449393
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lentic  
Specific Ecosystem
Epilimnion  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?