PROJECT NAME
GOLD Project ID
Gp0052188  
Project Name
Mesophilic microbial communities from the Joint Bioenergy Institute, California, USA of rice/straw/compost enrichment - totalRNA_1   
Other Names
  
Legacy ER Sample ID
10837  
Legacy GOLD ID
Gs0001029  
NCBI BioProject Name
  
NCBI BioProject ID
  
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI Jane Khudyakov
Added By Ioanna Pagani on 2011-02-08
Last Modified By Michelle Isbandi on 2014-12-18
Project Comments
Compost sample  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metatranscriptome  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute DOE Joint Bioenergy Institute (JBEI) (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Rice-straw enriched compost microbial community from Berkeley
Biosamples Mesophilic microbial communities from the Joint Bioenergy Institute, California, USA of rice/straw/compost enrichment - totalRNA_1
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
Illumina paired end  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Mesophilic microbial communities from the Joint Bioenergy Institute, California, USA of rice/straw/compost enrichment - totalRNA_1
Other Names (alias, synonyms, short names)
  
Sample Description
samples were taken from the bioreactors after four passes and a total of four weeks of incubation  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1076179
GOLD CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Solid waste  
Ecosystem Type
Composting  
Ecosystem Subtype
Grass  
Specific Ecosystem
Bioreactor  

 

 

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