PROJECT NAME
GOLD Project ID
Gp0052055  
Project Name
Freshwater sediment microbial communities from Laguna de Carrizo, Central Spain - shallow section  
Other Names
  
Legacy ER Sample ID
10592  
Legacy GOLD ID
Gs0000915  
NCBI BioProject Name
  
NCBI BioProject ID 49615
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI
Added By Ioanna Pagani on 2010-11-29
Last Modified By Michelle Isbandi on 2014-12-18
Project Comments
Freshwater sediment sample  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metagenome  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center
  
Collaborating Institute ANRT (France)
Institute of Catalysis, The Higher Council for Scientific Research (CSIC) (Spain)
Funding Agency
  
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Microbial ecology 62(4):824-37 Taxonomic and functional metagenomic profiling of the microbial community in the anoxic sediment of a sub-saline shallow lake (Laguna de Carrizo, Central Spain).
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Sediment microbial communities from Laguna de Carrizo, Spain
Biosamples Sediment ecosystem from Laguna de Carrizo, Spain
Analysis Projects Freshwater sediment microbial communities from Laguna de Carrizo, Central Spain - shallow section
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Sediment ecosystem from Laguna de Carrizo, Spain
Other Names (alias, synonyms, short names)
  
Sample Description
anoxic brackish sediment of a sub-saline shallow lake originated by human activity, namely, plaster extraction  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lentic  
Specific Ecosystem
Sediment  

 

 

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