PROJECT NAME
GOLD Project ID
Gp0051981  
Project Name
Atta colombica fungus garden Bottom  
Other Names
  
Legacy ER Sample ID
10481  
Legacy GOLD ID
Gs0000840  
NCBI BioProject Name
  
NCBI BioProject ID
  
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI Cameron Currie
Added By Ioanna Pagani on 2010-10-15 00:00:00.0
Last Modified By Ioanna Pagani on 2013-01-17 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metagenome  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Wisconsin, Madison (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications The ISME journal 6(9):1688-701 Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Leaf cutter ant microbial communities from the University of Wisconsin-Madison, USA, from fungus growing ant-garden
Biosamples Leaf-cutter ant fungus garden ecosystem from Gamboa, Panama - Atta colombica fungus garden Bottom
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Library Method (MIGS-28)
454 Titanium  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
55  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Leaf-cutter ant fungus garden ecosystem from Gamboa, Panama - Atta colombica fungus garden Bottom
Other Names (alias, synonyms, short names)
  
Sample Description
  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Arthropoda  
Ecosystem Type
Symbiotic fungal gardens and galleries  
Ecosystem Subtype
Fungus garden  
Specific Ecosystem
Garden dump  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?