PROJECT NAME
GOLD Project ID
Gp0051908  
Project Name
Hoatzin crop microbial communities from Cojedes, Venezuela - Epithelial fraction 12  
Other Names
  
Legacy ER Sample ID
10414  
Legacy GOLD ID
Gs0000616  
NCBI BioProject Name Hoatzin crop microbial communities from Cojedes, Venezuela - Epithelial fraction 12
NCBI BioProject ID 336947
NCBI BioProject Accession
PRJNA336947  
NCBI Locus Tag
BEY80  
NCBI BioSample Accession
SAMN05518129  
PI Susannah Tringe
Added By Ioanna Pagani on 2010-10-13
Last Modified By Tatiparthi B. Reddy on 2012-01-24
Project Comments
  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metagenome  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Puerto Rico
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Hoatzin crop microbial communities from Cojedes, Venezuela
Biosamples Hoatzin crop microbial communities from Cojedes, Venezuela - Epithelial fraction 12
Analysis Projects Hoatzin crop microbial communities from Cojedes, Venezuela - Epithelial fraction 12
Hoatzin crop microbial communities from Cojedes, Venezuela - Epithelial fraction 12
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Sanger
Library Method (MIGS-28)
454 std library 0.5 run and 1 lane of Illumina 113bp Paired End run. pyrotag sequencing as well.  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
43  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Hoatzin crop microbial communities from Cojedes, Venezuela - Epithelial fraction 12
Other Names (alias, synonyms, short names)
  
Sample Description
  
SAMPLE TAXONOMY
NCBI Taxonomy ID 749906
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Birds  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Crop  
Specific Ecosystem
Lumen  

 

 

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