PROJECT NAME
GOLD Project ID
Gp0051810  
Project Name
Amitermes wheeleri hindgut microbial communities from Arizona, USA - 3  
Other Names
Amitermes wheeleri hindgut microbiota, collected from cow dung in the Arizona desert, USA  
Legacy ER Sample ID
10388  
Legacy GOLD ID
Gs0000692  
NCBI BioProject Name
  
NCBI BioProject ID
  
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI Phil Hugenholtz
Added By Shaomei He on 2010-06-27
Last Modified By Michelle Isbandi on 2014-02-18
Project Comments
  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metagenome  
PROJECT INFORMATION
Project Status
complete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications PloS one 8(4):e61126 Comparative metagenomic and metatranscriptomic analysis of hindgut paunch microbiota in wood- and dung-feeding higher termites.
Other Publications
  
PROJECT COMPOSITION
Studies Termite hindgut microbial communities from Amitermes wheeleri in the Arizona desert and from Nasutitermes corniger in Florida, USA
Biosamples Amitermes wheeleri hindgut microbial communities from Arizona, USA - 3
Analysis Projects Amitermes wheeleri hindgut microbial communities from Arizona, USA - 3
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina GAii
Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
48  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Amitermes wheeleri hindgut microbial communities from Arizona, USA - 3
Other Names (alias, synonyms, short names)
  
Sample Description
P3 hindgut segment of Amitermes wheeleri from Arizona, collected from cow dung  
SAMPLE TAXONOMY
NCBI Taxonomy ID 749906
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Arthropoda  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Hindgut  
Specific Ecosystem
P3 segment  

 

 

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