PROJECT NAME
GOLD Project ID
Gp0051432  
Project Name
Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil  
Other Names
  
Legacy ER Sample ID
268  
Legacy GOLD ID
Gs0000531  
NCBI BioProject Name
  
NCBI BioProject ID
  
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI James Tiedje
Added By Susannah Tringe on 2009-07-17 00:00:00.0
Last Modified By Michelle Isbandi on 2014-12-17 00:00:00.0
Project Comments
Switchgrass rhizosphere sample  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metagenome  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Michigan State University (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Switchgrass rhizosphere bulk soil microbial community from Michigan, US
Biosamples Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil
Analysis Projects Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil
Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Library Method (MIGS-28)
454 Titanium  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
57  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil
Other Names (alias, synonyms, short names)
  
Sample Description
Bulk soil from a switchgrass field  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Rhizoplane  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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