PROJECT NAME
GOLD Project ID
Gp0051385  
Project Name
Nasutitermes corniger hindgut microbial communities from Florida, USA  
Other Names
Nasutitermes corniger hindgut microbiota, obtained from a laboratory wood-feeding colony in Florida, USA (Metagenome assembly)  
Legacy ER Sample ID
246  
Legacy GOLD ID
Gs0000482  
NCBI BioProject Name
  
NCBI BioProject ID
  
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI Phil Hugenholtz
Added By Shaomei He on 2009-04-15 00:00:00.0
Last Modified By Michelle Isbandi on 2014-02-18 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metagenome  
PROJECT INFORMATION
Project Status
complete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications PloS one 8(4):e61126 Comparative metagenomic and metatranscriptomic analysis of hindgut paunch microbiota in wood- and dung-feeding higher termites.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Termite hindgut microbial communities from Amitermes wheeleri in the Arizona desert and from Nasutitermes corniger in Florida, USA
Biosamples Nasutitermes corniger hindgut microbial communities from Florida, USA
Analysis Projects Nasutitermes corniger hindgut microbial communities from Florida, USA
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
47  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Nasutitermes corniger hindgut microbial communities from Florida, USA
Other Names (alias, synonyms, short names)
  
Sample Description
P3 hindgut segment of laboratory Nasutitermes corniger from Florida  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Arthropoda  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Hindgut  
Specific Ecosystem
P3 segment  

 

 

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