PROJECT NAME
GOLD Project ID
Gp0051375  
Project Name
Canis familiaris fecal microbial communities from University of Illinois at Urbana-Champaign - beet pulp 1  
Other Names
Canine Beet Pulp fecal Metegenome  
Legacy ER Sample ID
253  
Legacy GOLD ID
Gs0000542  
NCBI BioProject Name Phylogenetic and gene-centric metagenomics of the canine intestinal microbiome reveals similarities with humans and mice
NCBI BioProject ID 38653
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI Scot E. Dowd
Added By Scot E. Dowd on 2009-06-10
Last Modified By Michelle Isbandi on 2014-12-10
Project Comments
CAM_S_442  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metagenome  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications The ISME journal 5(4):639-49 Phylogenetic and gene-centric metagenomics of the canine intestinal microbiome reveals similarities with humans and mice.
Other Publications
  
PROJECT COMPOSITION
Studies Canis familiaris fecal microbial communities from the University of Illinois at Urbana-Champaign
Biosamples Canis familiaris fecal microbial communities from University of Illinois at Urbana-Champaign - beet pulp 1
Analysis Projects Canis familiaris fecal microbial communities from University of Illinois at Urbana-Champaign - beet pulp 1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
40  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Canis familiaris fecal microbial communities from University of Illinois at Urbana-Champaign - beet pulp 1
Other Names (alias, synonyms, short names)
  
Sample Description
Feces from Canis familiaris fed beet pulp  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1169740
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  

 

 

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