PROJECT NAME
GOLD Project ID
Gp0051177  
Project Name
Poplar biomass bioreactor microbial communities from Brookhaven National Lab, NY - total biomass decay community  
Other Names
  
Legacy ER Sample ID
10147  
Legacy GOLD ID
Gs0000131  
NCBI BioProject Name Poplar biomass bioreactor microbial communities from Brookhaven National Lab, NY - total biomass decay community
NCBI BioProject ID 337101
NCBI BioProject Accession
PRJNA337101  
NCBI Locus Tag
BE034  
NCBI BioSample Accession
SAMN05518014  
PI Daniel van der Lelie
Added By Susannah Tringe on 2008-04-11
Last Modified By Michelle Isbandi on 2014-12-16
Project Comments
Bioreactor sample  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metagenome  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications PloS one 7(5):e36740 The metagenome of an anaerobic microbial community decomposing poplar wood chips.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Poplar biomass bioreactor microbial communities from Brookhaven National Lab, NY
Biosamples Poplar biomass bioreactor microbial communities from Brookhaven National Lab, NY - total biomass decay community
Analysis Projects Poplar biomass bioreactor microbial communities from Brookhaven National Lab, NY - total biomass decay community
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Dideoxysequencing
Library Method (MIGS-28)
Fosmid  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
55  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Poplar biomass bioreactor microbial communities from Brookhaven National Lab, NY - total biomass decay community
Other Names (alias, synonyms, short names)
  
Sample Description
  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1076179
GOLD CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Solid waste  
Ecosystem Type
Composting  
Ecosystem Subtype
Wood  
Specific Ecosystem
Bioreactor  

 

 

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