PROJECT NAME
GOLD Project ID
Gp0051151  
Project Name
Chicken cecal microbial communities from University of Illinois, Urbana-Champaign, USA - Sample B  
Other Names
  
Legacy ER Sample ID
19  
Legacy GOLD ID
Gs0000293  
NCBI BioProject Name
  
NCBI BioProject ID
  
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI Dinsdale E
Added By Nikos Kyrpides on 2008-03-21
Last Modified By Michelle Isbandi on 2014-10-17
Project Comments
  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metagenome  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center
  
Collaborating Institute University of Illinois, Urbana-Champaign (USA)
Funding Agency
  
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications PloS one 3(8):e2945 Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Chicken cecum microbial communities from University of Illinois, Urbana-Champaign
Biosamples Chicken cecal microbial communities from University of Illinois, Urbana-Champaign, USA - Sample B
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Chicken cecal microbial communities from University of Illinois, Urbana-Champaign, USA - Sample B
Other Names (alias, synonyms, short names)
  
Sample Description
45 day old chicken cecum challenged with Campylobacter jejuni  
SAMPLE TAXONOMY
NCBI Taxonomy ID 506600
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Birds  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Ceca  
Specific Ecosystem
Lumen  

 

 

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