PROJECT NAME
GOLD Project ID
Gp0051103  
Project Name
Human sputum viral communities from San Diego State University, California, USA - HealSputSDVir070706  
Other Names
  
Legacy ER Sample ID
10115  
Legacy GOLD ID
Gs0000190  
NCBI BioProject Name
  
NCBI BioProject ID 28439
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI Furlan M
Added By Nikos Kyrpides on 2008-03-19
Last Modified By Michelle Isbandi on 2014-08-04
Project Comments
May include human DNA contamination  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metagenome  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center
  
Collaborating Institute San Diego State University (USA)
Funding Agency
  
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Nature 452(7187):629-32 Functional metagenomic profiling of nine biomes.
Other Publications
  
PROJECT COMPOSITION
Studies Human lung viral communities from San Diego State University, California, USA, from cystic fibrosis patients
Biosamples Human lung ecosystem from San Diego State University, California, USA
Analysis Projects Human sputum viral communities from San Diego State University, California, USA - HealSputSDVir070706
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Human lung ecosystem from San Diego State University, California, USA
Other Names (alias, synonyms, short names)
  
Sample Description
sputum of an asymptomatic patient. Healthy patients and patients with cystic fibrosis  
SAMPLE TAXONOMY
NCBI Taxonomy ID 433733
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Respiratory system  
Ecosystem Subtype
Pulmonary system  
Specific Ecosystem
Viriome  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?