PROJECT NAME
GOLD Project ID
Gp0050997  
Project Name
Human periodontal pocket microbial communities from Stanford, California, USA - TM7a  
Other Names
  
Legacy ER Sample ID
10027  
Legacy GOLD ID
Gs0000265  
NCBI BioProject Name
  
NCBI BioProject ID 19081
NCBI BioProject Accession
PRJNA19081  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI
Added By Nikos Kyrpides on 2007-12-04
Last Modified By Michelle Isbandi on 2014-08-06
Project Comments
  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metagenome  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Stanford University (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America Dissecting biological dark matter with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Human periodontal pocket microbial communities from Stanford, California, USA
Biosamples Human periodontal pocket microbial communities from Stanford, California, USA - TM7a
Analysis Projects Human periodontal pocket microbial communities from Stanford, California, USA - TM7a
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
34  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Human periodontal pocket microbial communities from Stanford, California, USA - TM7a
Other Names (alias, synonyms, short names)
  
Sample Description
Human oral microflora  
SAMPLE TAXONOMY
NCBI Taxonomy ID 447426
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Oral  
Specific Ecosystem
Periodontal pockets  

 

 

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