PROJECT NAME
GOLD Project ID
Gp0050979  
Project Name
Fossil microbial communities from Whale Fall, Santa Cruz Basin - Microbial Mat Sample  
Other Names
  
Legacy ER Sample ID
10009  
Legacy GOLD ID
Gs0000011  
NCBI BioProject Name
  
NCBI BioProject ID 32355
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI Eddy Rubin
Added By Nikos Kyrpides on 2007-12-04 00:00:00.0
Last Modified By Jyothi Mallajosyula on 2014-10-17 00:00:00.0
Project Comments
lipid-rich nutrient environment  
PROJECT TYPE
Specimen Biome
Nucleic Acid
  
Sequencing Strategy
Metagenome  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications "Science (New York, N.Y.)" Comparative metagenomics of microbial communities.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Fossil microbial community from Whale Fall, Santa Cruz Basin of the Pacific Ocean
Biosamples Fossil microbial communities from Whale Fall, Santa Cruz Basin - Microbial Mat Sample
Analysis Projects Fossil microbial communities from Whale Fall, Santa Cruz Basin - Microbial Mat Sample
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
52  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Fossil microbial communities from Whale Fall, Santa Cruz Basin - Microbial Mat Sample
Other Names (alias, synonyms, short names)
  
Sample Description
Sunken whale skeleton carcass (sunk 1998)  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Fossil  
Specific Ecosystem
Whale fall  

 

 

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