PROJECT INFORMATION
GOLD Project ID
Gp0050856  
Project Name
Urochloa fusca LBJWC-52  
Other Names
  
Legacy ER Project ID
58427  
Legacy GOLD ID
Gi0058427  
NCBI BioProject Name Urochloa fusca LBJWC-52
NCBI BioProject ID 234780
NCBI BioProject Accession PRJNA234780
NCBI Locus Tag
BS81  
NCBI BioSample Accession SAMN05660465
PI Thomas P. Brutnell
Added By JGI automated process on 2013-11-07
Last Modified By Supratim Mukherjee on 2018-10-01
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Doubling the number of Panicoideae genome sequences  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Doubling the number of Panicoideae genome sequences
Organism Urochloa fusca LBJWC-52
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-Rapid
Illumina HiSeq 2500-1TB
Illumina HiSeq 2500
PacBio Sequel
PacBio RS II
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0050856
Organism Name
Urochloa fusca LBJWC-52  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
PLANTS-STREPTOPHYTA  
Genus
Urochloa  
Genus Synonyms
  
Species
Urochloa fusca  
Subspecies
  
Species Synonyms
  
Strain
  
Strain Synonyms
  
Serovar-Biovar
LBJWC-52  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 744485
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Viridiplantae  
NCBI Phylum
Streptophyta  
NCBI Class
Liliopsida  
NCBI Order
Poales  
NCBI Family
Poaceae  
NCBI Genus
Urochloa  
NCBI Species
Urochloa fusca  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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