PROJECT INFORMATION
GOLD Project ID
Gp0039001  
Project Name
Hortaea werneckii EXF-2000  
Other Names
  
Legacy ER Project ID
45106  
Legacy GOLD ID
Gi0045106  
NCBI BioProject Name Hortaea werneckii EXF-2000
NCBI BioProject ID 87027
NCBI BioProject Accession PRJNA87027
NCBI Locus Tag
  
NCBI BioSample Accession SAMN02147108
PI
Added By JGI automated process on 2013-04-02
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of Ljubljana
Collaborating Institute
  
Funding Agency
  
Project Description
  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications PloS one 8(8):e71328 Whole genome duplication and enrichment of metal cation transporters revealed by de novo genome sequencing of extremely halotolerant black yeast Hortaea werneckii.

Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX283449
Experiment Title Hortaea werneckii genome sequencing, raw reads.
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection unspecified
Library Name Hw
Library Layout PAIRED
Library Instrument ILLUMINA_GENOME_ANALYZER_I_IX
Spot Length 152
PROJECT COMPOSITION
Study Hortaea werneckii EXF-2000 Genome sequencing
Organism Hortaea werneckii EXF-2000
Analysis Projects Hortaea werneckii EXF-2000
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAIIx
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0039001
Organism Name
Hortaea werneckii EXF-2000  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Hortaea  
Genus Synonyms
  
Species
Hortaea werneckii  
Subspecies
  
Species Synonyms
  
Strain
EXF-2000  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1157616
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Ascomycota  
NCBI Class
Dothideomycetes  
NCBI Order
Capnodiales  
NCBI Family
Teratosphaeriaceae  
NCBI Genus
Hortaea  
NCBI Species
Hortaea werneckii  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Hypersaline  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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