PROJECT INFORMATION
GOLD Project ID
Gp0036414  
Project Name
Massariosphaeria phaeospora CBS 611.86  
Other Names
  
Legacy ER Project ID
42354  
Legacy GOLD ID
Gi0042354  
NCBI BioProject Name Massariosphaeria phaeospora CBS 611.86
NCBI BioProject ID 333966
NCBI BioProject Accession PRJNA333966
NCBI Locus Tag
BDV95  
NCBI BioSample Accession SAMN05446820
PI Joseph Spatafora
Added By JGI automated process on 2013-03-11
Last Modified By JGI automated process on 2019-09-16
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
1000 Fungal Genomes  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid
  
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX3538758
Experiment Title Massariosphaeria phaeospora CBS 611.86 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BAXGN
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX3538759
Experiment Title Massariosphaeria phaeospora CBS 611.86 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BAXGN
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX3538757
Experiment Title Massariosphaeria phaeospora CBS 611.86 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BAXGN
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX3538761
Experiment Title Massariosphaeria phaeospora CBS 611.86 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BAXGN
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX3538762
Experiment Title Massariosphaeria phaeospora CBS 611.86 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BAXGN
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX3538760
Experiment Title Massariosphaeria phaeospora CBS 611.86 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BAXGN
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX3538765
Experiment Title Massariosphaeria phaeospora CBS 611.86 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BAXGN
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX3538763
Experiment Title Massariosphaeria phaeospora CBS 611.86 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BAXGN
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX3538764
Experiment Title Massariosphaeria phaeospora CBS 611.86 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BAXGN
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
PROJECT COMPOSITION
Study 1000 Fungal Genomes
Organism Massariosphaeria phaeospora CBS 611.86
Analysis Projects Massariosphaeria phaeospora CBS 611.86
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
Illumina HiSeq 2500-1TB
Illumina HiSeq 2500
Illumina HiSeq 2000
PacBio RS II
Library Method (MIGS-28)
PacBio >10kb w/ AMPure Bead Size Selection, Tubes; Illumina Regular Fragment, 300bp, Tubes  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0036414
Organism Name
Massariosphaeria phaeospora CBS 611.86  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Massariosphaeria  
Genus Synonyms
  
Species
Massariosphaeria phaeospora  
Subspecies
  
Species Synonyms
  
Strain
CBS 611.86  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
CBS 611.86  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 100035
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Ascomycota  
NCBI Class
Dothideomycetes  
NCBI Order
Pleosporales  
NCBI Family
  
NCBI Genus
Massariosphaeria  
NCBI Species
Massariosphaeria phaeospora  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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