PROJECT INFORMATION
GOLD Project ID
Gp0035868  
Project Name
Methanoculleus bourgensis MS2  
Other Names
  
Legacy ER Project ID
41151  
Legacy GOLD ID
Gi39348, Gc0041151  
NCBI BioProject Name Methanoculles bourgensis MS2T
NCBI BioProject ID 170845
NCBI BioProject Accession PRJEB167
NCBI Locus Tag
BN140  
NCBI BioSample Accession SAMEA2272323
PI
Added By JGI automated process on 2013-02-26
Last Modified By Tatiparthi Reddy on 2016-12-16
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center irena.maus
Collaborating Institute
  
Funding Agency
  
Project Description
Methane-producing bacterial strain MS2T(T = type strain) was isolated from a tannery by-products enrichment culture inoculated with sewage sludge. This methanogen was a non-motile, irregular coccoid organism (diameter, 1 to 2 ¿m) which used H2-CO2 and formate as methanogenic substrates. Acetate was required for growth but did not serve as a methanogenic substrate; yeast extract and Trypticase peptone were highly stimulatory. Growth occurred through the pH range from 5.5 to 8.0, with optimum growth at pH 6.7. The optimum temperature for growth was 39°C. The deoxyribonucleic acid base composition was 59 mol% guanine plus cytosine. The physiological and antigenic properties of this isolate place it in the genus Methanogenium. The organism is named Methanogenium bourgense sp. nov.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications 22965103

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Methanoculleus bourgensis MS2
Organism Methanoculleus bourgensis MS2
Analysis Projects Methanoculleus bourgensis MS2
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
61  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0023430
Organism Name
Methanoculleus bourgensis MS2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-METHANOMICROBIA  
Genus
Methanoculleus  
Genus Synonyms
  
Species
Methanoculleus bourgensis  
Subspecies
  
Species Synonyms
  
Strain
MS2  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 3045  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.194  
Exemplar Name
Methanoculleus bourgensis  
Taxon DOI
10.1601/tx.179  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1201294
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Methanomicrobia  
NCBI Order
Methanomicrobiales  
NCBI Family
Methanomicrobiaceae  
NCBI Genus
Methanoculleus  
NCBI Species
Methanoculleus bourgensis  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Wastewater  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY196674
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Sludge
Wastewater
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?