PROJECT INFORMATION
GOLD Project ID
Gp0035376  
Project Name
Penicillium expansum ATCC 24692  
Other Names
  
Legacy ER Project ID
40251  
Legacy GOLD ID
Gi38978  
NCBI BioProject Name Penicillium expansum ATCC 24692
NCBI BioProject ID 196076
NCBI BioProject Accession PRJNA196076
NCBI Locus Tag
K494  
NCBI BioSample Accession SAMN02745035
PI Dave Greenshields
Added By JGI automated process on 2013-01-24
Last Modified By JGI automated process on 2019-04-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX872071
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection size fractionation
Library Name NHYX
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
 
SRA Experiment Id SRX872070
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name NASP
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
PROJECT COMPOSITION
Study Genome and transcriptome sequencing of phosphate-solubilizing Penicillium species to understand fungal contributions to the phosphorus cycle.
Organism Penicillium expansum ATCC 24692
Analysis Projects Penicillium expansum ATCC 24692
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Illumina HiSeq 2000
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Tubes  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0035376
Organism Name
Penicillium expansum ATCC 24692  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Penicillium  
Genus Synonyms
  
Species
Penicillium expansum  
Subspecies
  
Species Synonyms
  
Strain
ATCC 24692  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC 24692  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 27334
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Ascomycota  
NCBI Class
Eurotiomycetes  
NCBI Order
Eurotiales  
NCBI Family
Aspergillaceae  
NCBI Genus
Penicillium  
NCBI Species
Penicillium expansum  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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