PROJECT NAME
GOLD Project ID
Gp0033594  
Project Name
Bartonella bacilliformis INS  
Other Names
  
Legacy ER Project ID
38377  
Legacy GOLD ID
Gi21626  
NCBI BioProject Name Bartonella bacilliformis INS
NCBI BioProject ID 170060
NCBI BioProject Accession
PRJNA170060  
NCBI Locus Tag
BBINS  
NCBI BioSample Accession
SAMN02470056  
PI
Added By JGI automated process on 2012-11-08
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center Peru National Institute of Health (Colombia)
Collaborating Institute
  
Funding Agency
  
Project Description
Bartonellosis, or Carrion?s disease, is caused by Bartonella bacilliformis, has long been recognized in the Andean region of South America, particularly in the high valleys lining the western side of the cordillera in central Peru. Carrion?s disease has two different clinical phases. During the phase also called ?Oroya fever?, B. bacilliformis invades red blood cells and produces severe hemolytic anemia. The chronic phase, also known as ?verruga peruana?, is characterized by skin nodules and mulaire lesions, which usually bleed and leads to fibrosis. The complete genome sequencing of B. bacilliformis strain INS will provide insight into the genes involved in virulence, moreover specific genes from B. bacilliformis that could be useful in the development of vaccines to achieve protection against Carrion?s disease.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Whole Genome Sequencing and Comparative Analysis of Bartonella bacilliformis Strain INS, the Causative Agent of Carrion's Disease.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Bartonella bacilliformis INS
Analysis Projects Bartonella bacilliformis INS
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) SOLiD
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
38  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0033594
Organism Name
Bartonella bacilliformis INS  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Bartonella  
Genus Synonyms
  
Species
Bartonella bacilliformis  
Subspecies
  
Species Synonyms
  
Strain
INS  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1206782
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Bartonellaceae  
NCBI Genus
Bartonella  
NCBI Species
Bartonella bacilliformis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Circulatory system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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