PROJECT INFORMATION
GOLD Project ID
Gp0025202  
Project Name
Paraburkholderia phenoliruptrix BR3459  
Other Names
Burkholderia phenoliruptrix BR3459  
Legacy ER Project ID
29123  
Legacy GOLD ID
Gi21074, Gc02399  
NCBI BioProject Name Burkholderia phenoliruptrix BR3459a
NCBI BioProject ID 174166
NCBI BioProject Accession PRJNA174166
NCBI Locus Tag
BUPH  
NCBI BioSample Accession
PI Ana de Vasconcelos
Added By JGI automated process on 2012-09-06
Last Modified By Supratim Mukherjee on 2017-03-03
Project Comments
  
Project Status
Complete and Published  
Project Relevance Agricultural
Sequencing Center Laboratorio Nacional de Computacao Cientifica (Brazil)
Collaborating Institute
  
Funding Agency
  
Project Description
Strain BR3459a is an stable large-colony mucoid variant of strain BR3459 (= BR3462), a Burkholderia sp. rhizobia highly efficient in nitrogen fixation when associated with the endemic South American leguminous tree Mimosa flocculosa. Though strain BR3459a forms ineffective nodules on roots of Phaseolus vulgaris (common bean) and could be a nodule cheater, it interacts synergically with Rhizobium tropici improving common bean development and grain production.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(23):6675-6 Complete genome sequence of Burkholderia phenoliruptrix BR3459a (CLA1), a heat-tolerant, nitrogen-fixing symbiont of Mimosa flocculosa.
Other Publications
  
PROJECT COMPOSITION
Study Burkholderia phenoliruptrix BR3459
Analysis Projects Paraburkholderia phenoliruptrix BR3459
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
63  
Chromosome Count
2  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0025202
Organism Name
Paraburkholderia phenoliruptrix BR3459  
Other names (alias, synonyms, short names, common names)
Burkholderia phenoliruptrix BR3459  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Paraburkholderia  
Genus Synonyms
Burkholderia  
Species
Paraburkholderia phenoliruptrix  
Subspecies
  
Species Synonyms
  
Strain
BR3459  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1229205
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Burkholderiaceae  
NCBI Genus
Paraburkholderia  
NCBI Species
Paraburkholderia phenoliruptrix  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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