PROJECT NAME
GOLD Project ID
Gp0025001  
Project Name
Salmonella enterica enterica sv. Typhimurium LT2  
Other Names
  
Legacy ER Project ID
38192  
Legacy GOLD ID
Gi21441  
NCBI BioProject Name Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
NCBI BioProject ID 173397
NCBI BioProject Accession
PRJNA173397  
NCBI Locus Tag
HA15  
NCBI BioSample Accession
  
PI
Added By JGI automated process on 2012-11-08 00:00:00.0
Last Modified By Jon Bertsch on 2014-06-20 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance
  
Sequencing Center Uppsala University (Sweden)
Collaborating Institute
  
Funding Agency
  
Project Description
Experimental evolution of DA19306 (Salmonella typhimurium LT2 hisA::FRT trpF::FRT araB::FRT-tet-FRT / F'128 lacI::FRT zzf1831::T-his(hisA[D10G dup13-15]) dinB::FRT). Evolved for improved HisA and TrpF activity of the mutant hisA gene carried on the F' episome by serial passage in liquid M9+0.2% glycerol. The Illumina reads contain the chromosome, the F' plasmid and pSLT.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Salmonella enterica enterica sv. Enteritidis CDC_2010K_4903
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0025001
Organism Name
Salmonella enterica enterica sv. Typhimurium  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Salmonella  
Genus Synonyms
  
Species
Salmonella enterica  
Subspecies
enterica  
Species Synonyms
  
Strain
  
Strain Synonyms
  
Serovar-Biovar
Typhimurium  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
10.1601/ex.3292  
Exemplar Name
Salmonella enterica enterica  
Taxon DOI
10.1601/tx.3292  
Biosafety Level
2  
Organism Comments
Experimental evolution of DA19306 derived from ATCC 700720  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 99287
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacteriales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Salmonella  
NCBI Species
Salmonella enterica  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 118393
Genbank 16S ID D12814
Synonym List
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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