PROJECT NAME
GOLD Project ID
Gp0023356  
Project Name
Nocardiopsis alba ATCC BAA-2165  
Other Names
  
Legacy ER Project ID
27227  
Legacy GOLD ID
Gi19261, Gc02321  
NCBI BioProject Name Nocardiopsis alba ATCC BAA-2165
NCBI BioProject ID 169662
NCBI BioProject Accession
PRJNA169662  
NCBI Locus Tag
B005  
NCBI BioSample Accession
  
PI
Added By JGI automated process on 2012-07-12 00:00:00.0
Last Modified By Auto script update processes on 2014-03-26 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Ohio University (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
The complete genome sequence will provide insights into the metabolisms and genetic regulatory networks of this genus of bacteria that enable them to survive and live in a wide range of environment. Nocardiopsis alba ATCC BAA-2165 is isolated from honeybee guts.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(22):6358-9 Whole-genome sequence of Nocardiopsis alba strain ATCC BAA-2165, associated with honeybees.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Nocardiopsis alba ATCC BAA-2165
Analysis Projects Nocardiopsis alba ATCC BAA-2165
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
70  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0023356
Organism Name
Nocardiopsis alba ATCC BAA-2165  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Nocardiopsis  
Genus Synonyms
  
Species
Nocardiopsis alba  
Subspecies
  
Species Synonyms
  
Strain
ATCC BAA-2165  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC BAA-2165  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1205910
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Streptosporangiales  
NCBI Family
Nocardiopsaceae  
NCBI Genus
Nocardiopsis  
NCBI Species
Nocardiopsis alba  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Insecta  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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