PROJECT INFORMATION
GOLD Project ID
Gp0023116  
Project Name
Mycoplasma gallisepticum NC96_1596-4-2P  
Other Names
  
Legacy ER Project ID
27944  
Legacy GOLD ID
Gi19958, Gc02298  
NCBI BioProject Name Mycoplasma gallisepticum NC96_1596-4-2P
NCBI BioProject ID 86097
NCBI BioProject Accession PRJNA86097
NCBI Locus Tag
HFMG96NCA  
NCBI BioSample Accession SAMN02604158
PI Geary S
Added By JGI automated process on 2012-07-30
Last Modified By Supratim Mukherjee on 2017-03-17
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center University of Connecticut (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Mycoplasma gallisepticum is an emergent pathogen of wild passerine birds, primarily the American house finch (Carpodacus mexicanus) in which M. gallisepticum was first described in 1994 and has subsequently spread in an epizootic across the US. This project was aimed at characterizing HFMG genomic changes, those occurring as HFMG evolves across the epizootic and in response to new environmental and host pressures, and those associated with evolving phenotypes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications "Microbiology (Reading, England)" 158(Pt 8):2073-88 Extensive variation in surface lipoprotein gene content and genomic changes associated with virulence during evolution of a novel North American house finch epizootic strain of Mycoplasma gallisepticum.
Other Publications
  
PROJECT COMPOSITION
Study Mycoplasma gallisepticum NC96_1596-4-2P
Organism Mycoplasma gallisepticum NC96_1596-4-2P
Analysis Projects Mycoplasma gallisepticum NC96_1596-4-2P
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
32  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0023116
Organism Name
Mycoplasma gallisepticum NC96_1596-4-2P  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
TENERICUTES  
Genus
Mycoplasma  
Genus Synonyms
  
Species
Mycoplasma gallisepticum  
Subspecies
  
Species Synonyms
  
Strain
NC96_1596-4-2P  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1159199
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Tenericutes  
NCBI Class
Mollicutes  
NCBI Order
Mycoplasmatales  
NCBI Family
Mycoplasmataceae  
NCBI Genus
Mycoplasma  
NCBI Species
Mycoplasma gallisepticum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Birds  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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