PROJECT INFORMATION
GOLD Project ID
Gp0023108  
Project Name
Cycloclasticus sp. P1  
Other Names
  
Legacy ER Project ID
27936  
Legacy GOLD ID
Gi19950, Gc02443  
NCBI BioProject Name Cycloclasticus sp. P1
NCBI BioProject ID 85601
NCBI BioProject Accession PRJNA85601
NCBI Locus Tag
Q91  
NCBI BioSample Accession
PI Zongze Shao
Added By JGI automated process on 2012-07-30
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center Third Institute of Oceanography, State Oceanic Administration (China)
Collaborating Institute
  
Funding Agency National Natural Science Foundation of China (NSFC) (China)
Project Description
Complete Genome Sequence of pyrene-degrading Bacterium Cycloclasticus sp. P1  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(23):6677 Complete genome sequence of the pyrene-degrading bacterium Cycloclasticus sp. strain P1.
Other Publications
  
PROJECT COMPOSITION
Study Cycloclasticus sp. P1
Analysis Projects Cycloclasticus sp. P1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
42  
Chromosome Count
1  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0023108
Organism Name
Cycloclasticus sp. P1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Cycloclasticus  
Genus Synonyms
  
Species
Cycloclasticus sp. P1  
Subspecies
  
Species Synonyms
  
Strain
P1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 385025
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Thiotrichales  
NCBI Family
Piscirickettsiaceae  
NCBI Genus
Cycloclasticus  
NCBI Species
Cycloclasticus sp. P1  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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