PROJECT INFORMATION
GOLD Project ID
Gp0021811  
Project Name
Ruminiclostridium cellobioparum termitidis CT1112  
Other Names
  
Legacy ER Project ID
25945  
Legacy GOLD ID
Gi18090  
NCBI BioProject Name Ruminiclostridium cellobioparum termitidis CT1112
NCBI BioProject ID 167606
NCBI BioProject Accession PRJNA167606
NCBI Locus Tag
CTER  
NCBI BioSample Accession SAMN02471873
PI
Added By JGI automated process on 2012-06-18
Last Modified By Supratim Mukherjee on 2018-10-04
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Industrial
Sequencing Center Genome Quebec (Canada)
Collaborating Institute University of Manitoba (Canada)
Funding Agency
  
Project Description
Clostridium termitidis strain CT1112 from the gut of termite, which is a gram-positive, mesophilic, anaerobic and cellulose degrading bacterium  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequence of the Cellulolytic, Mesophilic, Anaerobic Bacterium Clostridium termitidis Strain CT1112 (DSM 5398).

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Clostridium termitidis CT1112
Organism Ruminiclostridium cellobioparum termitidis CT1112
Analysis Projects Ruminiclostridium cellobioparum termitidis CT1112
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
41  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0021811
Organism Name
Ruminiclostridium cellobioparum termitidis CT1112  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Ruminiclostridium  
Genus Synonyms
  
Species
Ruminiclostridium cellobioparum  
Subspecies
termitidis  
Species Synonyms
  
Strain
CT1112  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 5398  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4029  
Exemplar Name
Ruminiclostridium cellobioparum termitidis  
Taxon DOI
10.1601/tx.32994  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1195236
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Hungateiclostridiaceae  
NCBI Genus
Ruminiclostridium  
NCBI Species
Ruminiclostridium cellobioparum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Insecta  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID X71854
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Salinity
  
pH
7.5  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Host
Termite gut
Termite
Cellulosic substrates
Metabolisms Cellulose degrader
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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