PROJECT INFORMATION
GOLD Project ID
Gp0021783  
Project Name
Klebsiella oxytoca E718  
Other Names
  
Legacy ER Project ID
25873  
Legacy GOLD ID
Gc02244, Gc02286  
NCBI BioProject Name Klebsiella oxytoca E718
NCBI BioProject ID 167370
NCBI BioProject Accession PRJNA167370
NCBI Locus Tag
A225  
NCBI BioSample Accession
PI
Added By JGI automated process on 2012-06-08
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center National Cheng Kung University (Taiwan)
Collaborating Institute
  
Funding Agency
  
Project Description
Genomic sequencing of an NDM-1 positive antimicrobial resistance Klebsiella oxytoca strain. A K. oxytoca clinical isolated in 2010, from a patient underwent renal transplantation in China then presented to a hospital in Taiwan 7 days later. Culture from the pelvic abscess fluid found this strain producing NDM-1 metallo beta-lactamase  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(19):5454 Complete genome sequence of Klebsiella oxytoca E718, a New Delhi metallo-¿-lactamase-1-producing nosocomial strain.
Other Publications
  
PROJECT COMPOSITION
Study Klebsiella oxytoca E718
Analysis Projects Klebsiella oxytoca E718
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
56  
Chromosome Count
1  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0021783
Organism Name
Klebsiella oxytoca E718  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Klebsiella  
Genus Synonyms
  
Species
Klebsiella oxytoca  
Subspecies
  
Species Synonyms
  
Strain
E718  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1191061
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Klebsiella  
NCBI Species
Klebsiella michiganensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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