PROJECT NAME
GOLD Project ID
Gp0021539  
Project Name
Rickettsia honei RB  
Other Names
  
Legacy ER Project ID
25556  
Legacy GOLD ID
Gi17729  
NCBI BioProject Name Rickettsia honei RB
NCBI BioProject ID 158665
NCBI BioProject Accession
PRJNA158665  
NCBI Locus Tag
WSW  
NCBI BioSample Accession
SAMN02469768  
PI
Added By JGI automated process on 2012-05-18 00:00:00.0
Last Modified By Auto script update processes on 2014-10-31 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center Aix-Marseille University (France)
Collaborating Institute
  
Funding Agency
  
Project Description
R. honei strain RB has been isolated from a febrile patient on Flinders Island, Australia in 1991, and has been proposed for Flinders Island spotted fever group (FISF) agent which is pathogenic for humans and is transmitted to human by tick bites.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(15):4145 Genomic comparison of Rickettsia honei strain RBT and other Rickettsia Species.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Rickettsia honei RB
Analysis Projects Rickettsia honei RB
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
32  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0021539
Organism Name
Rickettsia honei RB  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Rickettsia  
Genus Synonyms
  
Species
Rickettsia honei  
Subspecies
  
Species Synonyms
  
Strain
RB  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.963  
Exemplar Name
Rickettsia honei  
Taxon DOI
10.1601/tx.963  
Biosafety Level
3  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1175313
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rickettsiales  
NCBI Family
Rickettsiaceae  
NCBI Genus
Rickettsia  
NCBI Species
Rickettsia honei  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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