PROJECT NAME
GOLD Project ID
Gp0021234  
Project Name
Thalassospira xiamenensis M-5, DSM 17429  
Other Names
  
Legacy ER Project ID
25640  
Legacy GOLD ID
Gi17813  
NCBI BioProject Name Thalassospira xiamenensis M-5 = DSM 17429
NCBI BioProject ID 161549
NCBI BioProject Accession
PRJNA161549  
NCBI Locus Tag
TH3  
NCBI BioSample Accession
  
PI
Added By JGI automated process on 2012-05-18
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Third Institute of Oceanography, State Oceanic Administration (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Thalassospira xiamenensis M-5 Genome Sequencing.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Publication
Database
  
Genome Publications Journal of bacteriology 194(24):6957 Genome sequence of Thalassospira xiamenensis type strain M-5.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Thalassospira xiamenensis M-5, DSM 17429
Analysis Projects Thalassospira xiamenensis M-5, DSM 17429
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
55  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0021234
Organism Name
Thalassospira xiamenensis M-5  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Thalassospira  
Genus Synonyms
  
Species
Thalassospira xiamenensis  
Subspecies
  
Species Synonyms
  
Strain
M-5  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
CGMCC 1.3998  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.11105  
Exemplar Name
Thalassospira xiamenensis  
Taxon DOI
10.1601/tx.11105  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1123366
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodospirillales  
NCBI Family
Rhodospirillaceae  
NCBI Genus
Thalassospira  
NCBI Species
Thalassospira xiamenensis  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Wastewater  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Spiral-shaped  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Oil polluted marine water
Sea water
Surface water
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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