PROJECT INFORMATION
GOLD Project ID
Gp0021113  
Project Name
Candidatus Liberibacter asiaticus gxpsy  
Other Names
  
Legacy ER Project ID
25113  
Legacy GOLD ID
Gi17286, Gc0025113  
NCBI BioProject Name Candidatus Liberibacter asiaticus str. gxpsy
NCBI BioProject ID 158395
NCBI BioProject Accession PRJNA158395
NCBI Locus Tag
WSI  
NCBI BioSample Accession
PI Hong Lin
Added By JGI automated process on 2012-05-18
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Agricultural
Sequencing Center U.S. Department of Agriculture (France)
Collaborating Institute
  
Funding Agency
  
Project Description
The bacterium causes citrus huanglongbing, a devastating disease of citrus which results in tremendous economic losses worldwide.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Complete Genome Sequence of a Chinese Strain of "Candidatus Liberibacter asiaticus".

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Candidatus Liberibacter asiaticus gxpsy
Organism Candidatus Liberibacter asiaticus gxpsy
Analysis Projects Candidatus Liberibacter asiaticus gxpsy
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
37  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0021113
Organism Name
Candidatus Liberibacter asiaticus gxpsy  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
  
Genus Synonyms
  
Species
Candidatus Liberibacter asiaticus gxpsy  
Subspecies
  
Species Synonyms
  
Strain
gxpsy  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1174529
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Rhizobiaceae  
NCBI Genus
Liberibacter  
NCBI Species
Candidatus Liberibacter asiaticus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
  
Motility
Motile  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Symbiotic
Symbiotic Physical Interaction
Endosymbiotic intracellular  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Huanglongbing
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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