| PROJECT INFORMATION | |
|---|---|
GOLD Project ID
|
Gp0020778
|
|
Project Name
|
Mycoplasma gallisepticum NC95_13295-2-2P
|
|
Other Names
|
|
|
Legacy ER Project ID
|
9548
|
|
Legacy GOLD ID
|
Gi16637, Gc02267
|
| NCBI BioProject Name | Mycoplasma gallisepticum NC95_13295-2-2P strain:House finch-associated |
|
NCBI BioProject ID
|
86095 |
|
NCBI BioProject Accession
|
PRJNA86095 |
|
NCBI Locus Tag
|
HFMG95NCA
|
|
NCBI BioSample Accession
|
SAMN02604157 |
| PI | Geary S |
| Added By |
JGI automated process
on 2012-04-04 |
| Last Modified By |
Alejandro Rodriguez Mojica
on 2018-07-12 |
| Project Comments |
|
|
Project Status
|
Complete and Published
|
|
Project Relevance
|
Evolution |
|
Sequencing Center
|
University of Connecticut
(USA)
|
|
Collaborating Institute
|
|
|
Funding Agency
|
National Science Foundation (NSF)
(USA)
|
|
Project Description
|
This project was aimed at characterizing HFMG genomic changes, those occurring as HFMG evolves across the epizootic and in response to new environmental and host pressures, and those associated with evolving phenotypes
|
|
Project Information Visibility
|
Public |
| PROJECT TYPE | |
|
Specimen
|
Organism |
|
Nucleic Acid
|
DNA |
|
Sequencing Strategy
|
Whole Genome Sequencing
|
| EXTERNAL PROJECT LINKS | |
|
Project Information
|
|
|
Database
|
|
|
Genome Publications
|
"Microbiology (Reading, England)"
158(Pt 8):2073-88
Extensive variation in surface lipoprotein gene content and genomic changes associated with virulence during evolution of a novel North American house finch epizootic strain of Mycoplasma gallisepticum.
|
|
Other Publications
|
|
| PROJECT COMPOSITION | |
| Study |
House finch-associated Mycoplasma gallisepticum |
| Organism |
Mycoplasma gallisepticum NC95_13295-2-2P |
| Analysis Projects |
Mycoplasma gallisepticum NC95_13295-2-2P |
| Number of Analysis Projects |
1 |
| Number of DAPs |
0
|
| SEQUENCING INFORMATION | |
|---|---|
|
Sequencing Status
|
Complete |
| Sequencing Quality (MIGS-31) |
Level 6: Finished |
|
Finishing Goal
|
|
|
Sequencing Comments
|
|
|
Sequencing Technology
(MIGS-29)
|
|
|
Library Method
(MIGS-28)
|
|
|
Number Of Reads
|
|
|
Read Size
|
|
|
Vector
|
|
| GC Percent |
32
|
| Chromosome Count |
1
|
| Plasmid Count |
0
|
| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0020778 |
| Organism Name |
Mycoplasma gallisepticum NC95_13295-2-2P
|
| Other names (alias, synonyms, short names, common names) |
|
| Organism Domain |
BACTERIAL
|
| Phylogeny |
TENERICUTES
|
| Genus |
Mycoplasma
|
| Genus Synonyms |
|
| Species |
Mycoplasma gallisepticum
|
| Subspecies |
|
| Species Synonyms |
|
| Strain |
NC95_13295-2-2P
|
| Strain Synonyms |
|
| Serovar-Biovar |
|
| Culture Collection ID |
|
| Type Strain |
No
|
| Exemplar DOI |
|
| Exemplar Name |
|
| Taxon DOI |
|
| Biosafety Level |
|
| Organism Comments |
|
| Cultured |
Yes
|
| Culture Type |
Isolate
|
| Organism Type |
Natural
|
| Uncultured Type |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
|
ORGANISM TAXONOMY
|
|
| NCBI Taxonomy ID |
1159198 |
| NCBI Superkingdom |
Bacteria
|
| NCBI Kingdom |
|
| NCBI Phylum |
Tenericutes
|
| NCBI Class |
Mollicutes
|
| NCBI Order |
Mycoplasmatales
|
| NCBI Family |
Mycoplasmataceae
|
| NCBI Genus |
Mycoplasma
|
| NCBI Species |
Mycoplasma gallisepticum
|
| ISOLATION CLASSIFICATION | |
| Ecosystem |
Host-associated
|
| Ecosystem Category |
Birds
|
| Ecosystem Type |
Unclassified
|
| Ecosystem Subtype |
Unclassified
|
| Specific Ecosystem |
Unclassified
|
| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
|
| Genbank 16S ID |
|
| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
Facultative
|
| Cell Shape |
Rod-shaped
|
| Motility |
Nonmotile
|
| Sporulation |
Nonsporulating
|
| Temperature Range |
Mesophile
|
| Temperature Optimum |
|
| Salinity |
|
| pH |
|
| Cell Diameter |
|
| Cell Length |
|
| Color |
|
| Gram Staining |
Gram-
|
| Biotic Relationships | Symbiotic |
| Symbiotic Physical Interaction |
Endosymbiotic intracellular
|
| Symbiotic Relationship |
Parasitic
|
| Symbiont Name |
|
| Symbiont Taxon ID |
|
| Cell Arrangements |
|
| Diseases |
Conjunctivitis |
| Known Habitats |
Host |
| Metabolisms |
|
| Phenotypes |
Parasite |
| Energy Sources |
Heterotroph |
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