PROJECT NAME
GOLD Project ID
Gp0020648  
Project Name
Rhodanobacter thiooxydans LCS2  
Other Names
  
Legacy ER Project ID
9880  
Legacy GOLD ID
Gi16969  
NCBI BioProject Name Rhodanobacter thiooxydans LCS2
NCBI BioProject ID 89549
NCBI BioProject Accession
PRJNA89549  
NCBI Locus Tag
UUA  
NCBI BioSample Accession
SAMN02469838  
PI
Added By JGI automated process on 2012-04-04 00:00:00.0
Last Modified By Auto script update processes on 2014-03-26 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Agricultural
Sequencing Center Georgia Institute of Technology (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Rhodanobacter thiooxydans LCS2 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(16):4461-2 Genome sequences for six Rhodanobacter strains, isolated from soils and the terrestrial subsurface, with variable denitrification capabilities.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Rhodanobacter thiooxydans LCS2
Analysis Projects Rhodanobacter thiooxydans LCS2
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
67  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0020648
Organism Name
Rhodanobacter thiooxydans LCS2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Rhodanobacter  
Genus Synonyms
  
Species
Rhodanobacter thiooxydans  
Subspecies
  
Species Synonyms
  
Strain
LCS2  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 18863  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.11295  
Exemplar Name
Rhodanobacter thiooxydans  
Taxon DOI
10.1601/tx.11295  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1163409
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Xanthomonadales  
NCBI Family
Rhodanobacteraceae  
NCBI Genus
Rhodanobacter  
NCBI Species
Rhodanobacter thiooxydans  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Unclassified  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 720867
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Biofilm
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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