PROJECT NAME
GOLD Project ID
Gp0020560  
Project Name
Borrelia crocidurae Achema  
Other Names
  
Legacy ER Project ID
9829  
Legacy GOLD ID
Gi16918, Gc02310  
NCBI BioProject Name Borrelia crocidurae str. Achema
NCBI BioProject ID 85135
NCBI BioProject Accession
PRJNA85135  
NCBI Locus Tag
Q7M  
NCBI BioSample Accession
  
PI Michel Drancourt
Added By JGI automated process on 2012-04-04
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center Aix-Marseille University (France)
Collaborating Institute
  
Funding Agency
  
Project Description
Clinical isolate from Senegal. The organism will be used for comparative analyses with the other recurrent fever borreliae.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(14):3723-4 Complete genome sequence of Borrelia crocidurae.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Borrelia crocidurae str. Achema
Analysis Projects Borrelia crocidurae Achema
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
28  
Chromosome Count
1  
Plasmid Count
39  
ORGANISM NAME
GOLD Organism ID Go0020560
Organism Name
Borrelia crocidurae Achema  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
SPIROCHAETES  
Genus
Borrelia  
Genus Synonyms
  
Species
Borrelia crocidurae  
Subspecies
  
Species Synonyms
  
Strain
Achema  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1155096
NCBI Kingdom
  
NCBI Phylum
Spirochaetes  
NCBI Class
Spirochaetia  
NCBI Order
Spirochaetales  
NCBI Family
Borreliaceae  
NCBI Genus
Borrelia  
NCBI Species
Borrelia crocidurae  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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